dsExposome Package

Development name

dsExposome

Name of server-side packages

dsExposome

Name of client-side packages

dsExposomeClient

Date this information was late updated/checked

03/05/2022

Description of packages purpose

This package is mostly a wrapper of the rexposome package, which is an R package for exposome characterization and exopsome-outcome test association. The implemented functions are the ones that have a non-disclosive return or the output is treated to be non-disclosive. The main functionalities implemented are:
  • Exploratory analysis of the exposome
  • ExWAS
  • Inverse ExWAS
  • Exposures PCA
  • Exposures HCPC
  • Exposures correlation

How to contact developer institution/team/individual

Xavier Escribà-Montagut (xavier.escriba@isglobal.org)

Latest version

2.0.3 - client, 2.0.4 - server

Type distribution licence

MIT + file LICENSE

Methods of obtaining package

CRAN Address

-

Web-site/ftp-site/other
-

What versions of R work with the package?

≥ 4.0.0

What R packages do the packages depend on?

dsExposome

dsBase (≥ 6.1.1)
rexposome
Biobase
FactoMineR
dplyr
ggplot2
reshape2
scales
stringr
wkb
methods
nortest

dsExposomeClient

dsBaseClient (≥ 6.1.1)
DSI
FactoMineR
circlize
corrplot
data.table
ggplot2
ggrepel
gridExtra
sf
stringr
tibble

Status

Released but needs testing.

Is the package tested?

Not thoroughly

Is the package documented?

Yes, a vignette linked on the GitHub repository README

Has the package had a disclosure audit?
No

Is the package suitable for deployment in the production environment? (Yes/No)

Yes, but some bugs can be expected.

Does your package have features to protect the privacy of data, or does it just provide remote analysis functionality?

Yes, the implemented methods have built in features to protect the data returned to the client.

Additional Information

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